Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907774.1_cds_XP_016457895.1_51571
CDS Infomation

[gene=LOC107781670] [db_xref=GeneID:107781670] [protein=ankyrin repeat protein SKIP35-like isoform X2] [protein_id=XP_016457895.1] [location=complement(join(88561..89370,93583..94015,94605..95164))] [gbkey=CDS]
Sequence

ATGGAAGAAGATAAGGCAGCTTTCAACATTAGTGAAGAAGAGACTATTTGTTCAGTGGAA
ACTGTACAAGTGAGAGGTGAGGGAAGCAATGGGAAAGTGGTATTTTCAAGAGAAGCTCCA
CTTGTACATAATAAGGACTTAATAGCAGGAGGCTGTAGTTGTGGAGTCAATAAGATTAAA
TCAAGGCTAGAAAATTCTGATTCAGAAAATGAGAAACTGGGTCCTGAAAAAAAGCTTAGC
AGACAAGATAGGATTGAGTTGGGGCGATTGTTCCAGGGTGCTGTGAGCGGCCATGATTGG
GAGCTGGCAGAGAGTTTGATCCTACTCGCTGATCCCCAAACTCTGAATGATGCTTTATGC
ATTGCTTTGGATTCAATCTGGTTTCTAACTAGTCAAGAGGAGTTGCATGGGATAACGGGT
TTGATTAAGATGATTATTGGTAATGGTGCATATGACTTCACTCGGGCTGTCCTAAGGACT
TCATTTCTTGCTTCTTGTGTTTCTGCGTGCCAGAGTCAAACAATGAGCCTTGCAAATACT
GTCACTGTAATGGCACAAAGGTTGCATGAACGACTGCAAGAATGCAATGGAGATGAAGTT
TTGAAGGTTGAAGCTGGTGCTAAGGTTCAGAAGTTCACTGAATGGGCTCTTAAATGTATA
GGTTACCATTCCCGCTGCCAAGGAAAGAGGTATAGGGTTGGGCATAACTCTGCCATTGAA
ATACAACTGCAGTTATCAGCTTTCAAAACATTTCTGGATCTTGCTGGGAACCACCTTACT
GGAAAGGACTTCACAGAAGCATTTGATGCAGCTTGCTTTCCGCTTACACTCTTCTCTAGT
TCATTTGATACTGGCTGGGCATCAGGAGTTTCAGCTACTGCAATTCAAGGATTGCTCGGC
ATGTTGGTGGAAGGGGGTGCGGACAATGTCAATCAGTGCTTTCTTGAAGCATCGCGTTTT
GGGAGCACAGAGCTGGTCCGCATTCTTTTGCAGATTGCTCAAAGGAACAGCTTGGATGTT
GATGTTGACCTGGCTTTGGGATTTGCTTCCCATTATGGTAAAATCGGAACTATGGAATGT
TTGGTGGAAGAGGGGAATGCAATGGCTTTCTTGGGCCCTCTGATGAGAGCTGCTGAGAGG
GGATCCCTGCAGGTTGTCGAGTGGTTCGTCAAAAGGGGATGCAGAGACATGGAACTATGT
CTAGCCCTCACAGCTGCGACCTCCAGTTGTCAGGTTGAAGTTGCTGCATATCTCCTTCCG
CACGTTCCGCAGCATATTCTTGCTGCCCTCAGCATCGAGATTCTTAAGGCTGCTGGTGAA
AGAAGCGGCGGGTCTCTTGATGGGGTAGCGTTTCTTCTGCGTTCAGACTTCCTTGGTGAC
CCTGTTGCTACTTATGCTGTTGCCGACAGTATTGCTAAATCTGATGATGATGATGATGCT
GTGACTCCCAATCTTAAGAGTTTCCTTCAGGAACATTGGTCGGAAGCTGCTTTCTTTGAT
GGGCTTAGGCAAGGACAAGAACACTACTTAAACCTTGTGCGTATTGTGAAATGGGGTGAA
TCTCCCATCTGTCTGAAGGATCTTCCTGGGCCCTTGAGGGTAGCAATAGCATACCTGCCA
CTGTATAGAGAAAGTGTTAAGGCAGGGGGCTATCTGCTACCTCAAAAACTTAGGGGACAG
CTCGTGGAAGCAGCCAAAAGGCTTGGCGGCGTAATACTGGACGAGGCAAACCAAGGGAAA
GAACTATTGGCTGTCTTAGAGCATCATCTTCCTCCTTTTTTGCTAAATGGATCTTATAAT
TAG

Peptide Sequence

PEP ID

XP_016457895.1
PEP Infomation

PREDICTED: ankyrin repeat protein SKIP35-like isoform X2 [Nicotiana tabacum]
Sequence

MEEDKAAFNISEEETICSVETVQVRGEGSNGKVVFSREAPLVHNKDLIAGGCSCGVNKIK
SRLENSDSENEKLGPEKKLSRQDRIELGRLFQGAVSGHDWELAESLILLADPQTLNDALC
IALDSIWFLTSQEELHGITGLIKMIIGNGAYDFTRAVLRTSFLASCVSACQSQTMSLANT
VTVMAQRLHERLQECNGDEVLKVEAGAKVQKFTEWALKCIGYHSRCQGKRYRVGHNSAIE
IQLQLSAFKTFLDLAGNHLTGKDFTEAFDAACFPLTLFSSSFDTGWASGVSATAIQGLLG
MLVEGGADNVNQCFLEASRFGSTELVRILLQIAQRNSLDVDVDLALGFASHYGKIGTMEC
LVEEGNAMAFLGPLMRAAERGSLQVVEWFVKRGCRDMELCLALTAATSSCQVEVAAYLLP
HVPQHILAALSIEILKAAGERSGGSLDGVAFLLRSDFLGDPVATYAVADSIAKSDDDDDA
VTPNLKSFLQEHWSEAAFFDGLRQGQEHYLNLVRIVKWGESPICLKDLPGPLRVAIAYLP
LYRESVKAGGYLLPQKLRGQLVEAAKRLGGVILDEANQGKELLAVLEHHLPPFLLNGSYN

Transcript Sequence

Gene sequence data has not been registered.